Basic Information
Locus ID:
pistato.v30242290
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 16822017 | 16829187 | - | pistato.v30242290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 110,696.94 Da | 46.09 | 87.33 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02536 | mTERF | 206 | 355 | 2.3E-23 | IPR003690 |
| Pfam | PF01657 | Salt stress response/antifungal | 469 | 558 | 3.8E-12 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 697 | 888 | 5.6E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 957 | 2.22E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 457 | 561 | 8.3E-27 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 764 | 938 | 6.2E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 657 | 763 | 1.2E-24 | - |
| Gene3D | G3DSA:1.25.70.10 | Transcription termination factor 3, mitochondrial | 106 | 365 | 4.8E-36 | IPR038538 |
| SMART | SM00733 | mt_12 | 209 | 240 | 2.1E-5 | IPR003690 |
| SMART | SM00733 | mt_12 | 310 | 341 | 1.3E-4 | IPR003690 |
| SMART | SM00733 | mt_12 | 149 | 180 | 61.0 | IPR003690 |
| SMART | SM00733 | mt_12 | 278 | 309 | 1.8 | IPR003690 |
| SMART | SM00733 | mt_12 | 242 | 273 | 29.0 | IPR003690 |
| SMART | SM00220 | serkin_6 | 695 | 932 | 4.0E-13 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 456 | 561 | 20.544191 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 695 | 981 | 31.580315 | IPR000719 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031284373.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A822XN63 | Receptor-like protein kinase At4g00960 OS=Nelumbo nucifera OX=4432 GN=HUJ06_022094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30198520, pistato.v30199530, pistato.v30242290 |