Basic Information
Locus ID:
pistato.v30239330
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 8703488 | 8710148 | - | pistato.v30239330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 145,543.80 Da | 48.27 | 97.08 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 920 | 979 | 1.9E-7 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 490 | 700 | 3.4E-40 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 480 | 735 | 7.09E-39 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 827 | 1217 | 4.76E-25 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 471 | 631 | 8.5E-23 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 635 | 719 | 5.2E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1017 | 1226 | 1.6E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 811 | 1014 | 1.4E-21 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 503 | 518 | 1.2E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 669 | 683 | 1.2E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 939 | 955 | 1.2E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 577 | 591 | 1.2E-14 | - |
| Coils | Coil | Coil | 924 | 944 | - | - |
| Coils | Coil | Coil | 267 | 301 | - | - |
| Coils | Coil | Coil | 375 | 409 | - | - |
| Coils | Coil | Coil | 759 | 779 | - | - |
| Coils | Coil | Coil | 159 | 193 | - | - |
| Coils | Coil | Coil | 33 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031285180.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067DPT4 | AAA domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g037851mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |