Basic Information
Locus ID:
pistato.v30239310
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 8646676 | 8654988 | - | pistato.v30239310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 150,934.67 Da | 44.41 | 97.59 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 808 | 867 | 5.4E-7 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 375 | 585 | 5.1E-43 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 711 | 1104 | 8.16E-31 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 364 | 622 | 2.1E-44 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 747 | 1112 | 5.0E-38 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 357 | 516 | 2.3E-29 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 520 | 610 | 6.3E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1131 | 1266 | 3.5E-10 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 554 | 568 | 1.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 462 | 476 | 1.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 388 | 403 | 1.2E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 827 | 843 | 1.2E-19 | - |
| Coils | Coil | Coil | 155 | 189 | - | - |
| Coils | Coil | Coil | 644 | 664 | - | - |
| Coils | Coil | Coil | 253 | 301 | - | - |
| Coils | Coil | Coil | 26 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031258426.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |