HalophFGD

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Basic Information
Locus ID: pistato.v30231360
Species & Taxonomic ID: Pistacia vera & 55513
Genome Assembly: GWHBKLD00000000
Description: disease resistance
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 34151802 34161518 - pistato.v30231360
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.20 63,983.43 Da 57.44 101.25 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14798 RX-CC_like 269 311 6.24347E-10 IPR038005
Pfam PF18052 Rx N-terminal domain 257 312 1.1E-19 IPR041118
SUPERFAMILY SSF52058 L domain-like 11 535 2.89E-24 -
Gene3D G3DSA:1.20.5.4130 - 244 335 6.5E-15 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 116 229 8.1E-11 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 348 562 1.0E-11 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 3 115 4.1E-12 IPR032675
Coils Coil Coil 259 279 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_031279872.1 putative disease resistance RPP13-like protein 1 [Pistacia vera] 0
TrEMBL A0A5C7IMG9 Disease resistance protein At3g14460 OS=Acer yangbiense OX=1000413 GN=EZV62_005194 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg25372, jg25931, jg5627, jg98
Aizoaceae Mesembryanthemum crystallinum 1 gene_8179
Amaranthaceae Atriplex hortensis 5 Ah009863, Ah009889, Ah019076, Ah036058, Ah039075
Amaranthaceae Beta vulgaris 3 BVRB_2g039430, BVRB_2g042620, BVRB_3g055850
Amaranthaceae Salicornia bigelovii 4 Sbi_jg18650, Sbi_jg43699, Sbi_jg48544, Sbi_jg56270
Amaranthaceae Salicornia europaea 3 Seu_jg16634, Seu_jg18383, Seu_jg18393
Amaranthaceae Suaeda aralocaspica 3 GOSA_00001612, GOSA_00012760, GOSA_00020394
Amaranthaceae Suaeda glauca 5 Sgl45205, Sgl49973, Sgl54057, Sgl59394, Sgl82219
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000008443, gene:ENSEOMG00000021078 ...
gene:ENSEOMG00000028941, gene:ENSEOMG00000031977, gene:ENSEOMG00000040147
Amaranthaceae Chenopodium quinoa 13 CQ.Regalona.r1.2AG0011790, CQ.Regalona.r1.2AG0017450 ...
CQ.Regalona.r1.2BG0005740, CQ.Regalona.r1.2BG0005770, CQ.Regalona.r1.2BG0014950, CQ.Regalona.r1.7BG0000380, CQ.Regalona.r1.7BG0016370, CQ.Regalona.r1.7BG0017810, CQ.Regalona.r1.8BG0011440, CQ.Regalona.r1.8BG0019630, CQ.Regalona.r1.9AG0012870, CQ.Regalona.r1.9AG0012990, CQ.Regalona.r1.9AG0020090
Anacardiaceae Pistacia vera 7 pistato.v30051160, pistato.v30051420, pistato.v30053570 ...
pistato.v30079740, pistato.v30231360, pistato.v30248360, pistato.v30248540
Apiaceae Apium graveolens 1 Ag4G01102
Arecaceae Cocos nucifera 4 scaffold010649G000010, scaffold013905G000010 ...
scaffold020636G000020, scaffold026009G000010
Arecaceae Phoenix dactylifera 1 gene-LOC113463296
Asteraceae Flaveria trinervia 1 Ftri7G04826
Casuarinaceae Casuarina equisetifolia 8 Ceq01G0210, Ceq01G0305, Ceq01G0319, Ceq01G0332, Ceq01G0588 ...
Ceq01G0734, Ceq01G0754, Ceq05G1246
Casuarinaceae Casuarina glauca 12 Cgl01G0168, Cgl01G0273, Cgl01G0275, Cgl01G0279, Cgl01G0282 ...
Cgl01G0913, Cgl02G3035, Cgl04G2658, Cgl05G0270, Cgl06G0120, Cgl06G0205, Cgl09G0198
Hydrocharitaceae Thalassia testudinum 1 gene.Thate01g21220
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-4453
Nitrariaceae Nitraria sibirica 5 evm.TU.LG03.1911, evm.TU.LG05.1168, evm.TU.LG05.1170 ...
evm.TU.LG06.1169, evm.TU.LG06.1185
Plantaginaceae Plantago ovata 10 Pov_00009514, Pov_00016723, Pov_00016901, Pov_00019932 ...
Pov_00020389, Pov_00023077, Pov_00025341, Pov_00034141, Pov_00034143, Pov_00041304
Poaceae Echinochloa crus-galli 26 AH04.2257, AH04.2258, AH04.2259, AH04.2313, AH06.1, AH08.414 ...
AH09.823, AH09.825, AH09.826, BH02.4507, BH04.931, BH04.948, BH05.3486, BH08.423, BH08.937, BH08.943, BH09.817, CH02.1404, CH04.1104, CH04.401, CH04.881, CH08.1067, CH08.1068, CH08.497, CH09.878, CH09.879
Poaceae Eleusine coracana subsp. coracana 22 gene-QOZ80_1AG0003970, gene-QOZ80_1BG0052390 ...
gene-QOZ80_1BG0052410, gene-QOZ80_2AG0114160, gene-QOZ80_3BG0269440, gene-QOZ80_4AG0301510, gene-QOZ80_5AG0391590, gene-QOZ80_5AG0396920, gene-QOZ80_5BG0445450, gene-QOZ80_5BG0445460, gene-QOZ80_7AG0552230, gene-QOZ80_7BG0583230, gene-QOZ80_7BG0583240, gene-QOZ80_7BG0583260, gene-QOZ80_7BG0584230, gene-QOZ80_7BG0588680, gene-QOZ80_8AG0624410, gene-QOZ80_8AG0631400, gene-QOZ80_8AG0631410, gene-QOZ80_9AG0678340, gene-QOZ80_9AG0678350, gene-QOZ80_9AG0684150
Poaceae Hordeum vulgare 10 HORVU.MOREX.r3.1HG0094070.1, HORVU.MOREX.r3.1HG0094080.1 ...
HORVU.MOREX.r3.1HG0094090.1, HORVU.MOREX.r3.2HG0216800.1, HORVU.MOREX.r3.2HG0216840.1.CDS1, HORVU.MOREX.r3.2HG0216880.1, HORVU.MOREX.r3.5HG0420380.1, HORVU.MOREX.r3.6HG0630800.1, HORVU.MOREX.r3.6HG0630920.1, HORVU.MOREX.r3.6HG0633870.1
Poaceae Lolium multiflorum 16 gene-QYE76_006631, gene-QYE76_015091, gene-QYE76_015099 ...
gene-QYE76_015100, gene-QYE76_015101, gene-QYE76_015102, gene-QYE76_015103, gene-QYE76_026485, gene-QYE76_057808, gene-QYE76_058082, gene-QYE76_062972, gene-QYE76_063664, gene-QYE76_071388, gene-QYE76_071389, gene-QYE76_071390, gene-QYE76_071391
Poaceae Oryza coarctata 7 Oco04G014780, Oco12G013910, Oco15G005230, Oco18G001980 ...
Oco18G001990, Oco21G003130, Oco21G003170
Poaceae Oryza sativa 11 LOC_Os02g38386.1, LOC_Os02g38392.1, LOC_Os05g23255.1 ...
LOC_Os08g16450.1, LOC_Os08g16460.1, LOC_Os11g10550.1, LOC_Os11g10570.1, LOC_Os11g10610.1, LOC_Os11g10620.1, LOC_Os11g10760.1, LOC_Os11g10770.1
Poaceae Paspalum vaginatum 16 gene-BS78_03G310900, gene-BS78_04G184800, gene-BS78_K184500 ...
gene-BS78_05G016000, gene-BS78_05G065500, gene-BS78_05G139700, gene-BS78_05G139900, gene-BS78_05G186200, gene-BS78_05G223900, gene-BS78_05G224000, gene-BS78_05G224200, gene-BS78_07G066000, gene-BS78_08G046200, gene-BS78_K184700, gene-BS78_K259900, gene-BS78_K260000
Poaceae Puccinellia tenuiflora 16 Pt_Chr0500612, Pt_Chr0500614, Pt_Chr0500615, Pt_Chr0500616 ...
Pt_Chr0500833, Pt_Chr0505841, Pt_Chr0505843, Pt_Chr0505844, Pt_Chr0505846, Pt_Chr0505850, Pt_Chr0505853, Pt_Chr0505855, Pt_Chr0505856, Pt_Chr0601196, Pt_Chr0603888, Pt_Chr0704763
Poaceae Sporobolus alterniflorus 20 Chr03G001180, Chr04G014910, Chr04G014920, Chr04G023030 ...
Chr08G001250, Chr08G003960, Chr15G009980, Chr15G009990, Chr17G005490, Chr17G010630, Chr19G018750, Chr20G004080, Chr24G002570, Chr25G015980, Chr25G016940, Chr25G016950, Chr25G016960, Chr25G016980, Chr30G015830, Chr31G003490
Poaceae Thinopyrum elongatum 18 Tel1E01G111200, Tel1E01G111400, Tel1E01G732500 ...
Tel2E01G775600, Tel3E01G887900, Tel4E01G619400, Tel5E01G016200, Tel5E01G770900, Tel5E01G771000, Tel6E01G110200, Tel6E01G729100, Tel6E01G729200, Tel6E01G729500, Tel6E01G730600, Tel6E01G731100, Tel7E01G145700, Tel7E01G171800, Tel7E01G171900
Poaceae Triticum dicoccoides 38 gene_TRIDC1AG063640, gene_TRIDC1AG063650 ...
gene_TRIDC1AG063700, gene_TRIDC1AG063710, gene_TRIDC1BG065740, gene_TRIDC1BG065750, gene_TRIDC1BG065760, gene_TRIDC1BG072890, gene_TRIDC1BG072910, gene_TRIDC1BG072940, gene_TRIDC2AG076590, gene_TRIDC2AG082340, gene_TRIDC2AG082360, gene_TRIDC2BG090420, gene_TRIDC2BG090430, gene_TRIDC3BG085760, gene_TRIDC4AG003670, gene_TRIDC4AG003680, gene_TRIDC4AG062210, gene_TRIDC4BG062450, gene_TRIDC4BG062460, gene_TRIDC4BG062480, gene_TRIDC5AG001050, gene_TRIDC5AG010590, gene_TRIDC5AG045970, gene_TRIDC5BG001030, gene_TRIDC5BG001080, gene_TRIDC5BG001090, gene_TRIDC5BG001140, gene_TRIDC5BG009710, gene_TRIDC5BG012370, gene_TRIDC5BG074650, gene_TRIDC6AG058910, gene_TRIDC6BG016590, gene_TRIDC6BG069670, gene_TRIDC6BG069710, gene_TRIDC7AG007600, gene_TRIDC7AG008660
Poaceae Triticum aestivum 67 TraesCS1A02G433600.1, TraesCS1A02G434000.1 ...
TraesCS1B02G416200.1, TraesCS1B02G442200.1, TraesCS1B02G469500.1, TraesCS1B02G469700.1, TraesCS1B02G470000.1, TraesCS1B02G470100.1, TraesCS1B02G470300.1, TraesCS1B02G470400.1.cds1, TraesCS1B02G470500.1, TraesCS1B02G470600.1, TraesCS1D02G419600.1, TraesCS1D02G443300.1, TraesCS1D02G443400.1, TraesCS1D02G443551.1.cds1, TraesCS2B02G161100.1, TraesCS2B02G624900.2, TraesCS2D02G573600.1, TraesCS2D02G573800.1, TraesCS2D02G573900.1, TraesCS3B02G593900.3, TraesCS3D02G531700.1, TraesCS4A02G026300.1, TraesCS4A02G380900.1.cds1, TraesCS4A02G389400.1.cds1, TraesCS4B02G382600.1, TraesCS4D02G103400.1, TraesCS5A02G007200.1.cds1, TraesCS5B02G005700.1, TraesCS5B02G058900.1, TraesCS5B02G059000.1, TraesCS5B02G499300.1.cds1, TraesCS5B02G499400.1.cds1, TraesCS5B02G499500.1, TraesCS5D02G005300.1, TraesCS5D02G005400.1, TraesCS5D02G005416.1.cds1, TraesCS5D02G005600.1, TraesCS5D02G029000.1, TraesCS5D02G499200.1, TraesCS5D02G499300.1, TraesCS5D02G499400.1, TraesCS5D02G499500.1.cds1, TraesCS5D02G499600.1.cds1, TraesCS6A02G400900.1, TraesCS6A02G401000.1, TraesCS6B02G117100.2, TraesCS6B02G440900.1, TraesCS6B02G441200.1, TraesCS6B02G442100.1, TraesCS6B02G442200.1, TraesCS6B02G443000.1, TraesCS6B02G443300.1, TraesCS6D02G384900.1, TraesCS7A02G069600.1, TraesCS7A02G069800.1, TraesCS7D02G065100.1, TraesCS7D02G065200.1, TraesCS7D02G065500.1, TraesCSU02G113800.1, TraesCSU02G132000.1, TraesCSU02G141500.1, TraesCSU02G153000.1, TraesCSU02G153200.1, TraesCSU02G160400.1, TraesCSU02G201600.1
Poaceae Zea mays 1 Zm00001eb116510_P001
Poaceae Zoysia japonica 8 nbis-gene-23321, nbis-gene-3245, nbis-gene-32534 ...
nbis-gene-37568, nbis-gene-48962, nbis-gene-50430, nbis-gene-54870, nbis-gene-55392
Poaceae Zoysia macrostachya 6 Zma_g19194, Zma_g19315, Zma_g20769, Zma_g20770, Zma_g5905 ...
Zma_g7335
Portulacaceae Portulaca oleracea 2 evm.TU.LG04.2254, evm.TU.LG17.598
Posidoniaceae Posidonia oceanica 1 gene.Posoc04g21290
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-27940, nbisL1-mrna-28166
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-10305, nbisL1-mrna-2664
Rhizophoraceae Kandelia candel 1 add.evm.TU.utg000023l.130
Rhizophoraceae Kandelia obovata 3 Maker00008233, Maker00010114, Maker00019105
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-21450, nbisL1-mrna-21453, nbisL1-mrna-21719 ...
nbisL1-mrna-22196
Salicaceae Populus euphratica 9 populus_peu13050, populus_peu13051, populus_peu13065 ...
populus_peu13084, populus_peu13085, populus_peu23925, populus_peu24698, populus_peu24712, populus_peu27828
Tamaricaceae Reaumuria soongarica 4 MSTRG.13832_chr08_+, MSTRG.13848_chr08_-, STRG.24360_chr08_- ...
STRG.8738_chr03_+
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