Basic Information
Locus ID:
pistato.v30230390
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 32802917 | 32807887 | - | pistato.v30230390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 58,141.71 Da | 31.24 | 112.89 | 0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13136 | MATE_DinF_like | 56 | 529 | 1.7248E-106 | IPR044644 |
| Pfam | PF01554 | MatE | 190 | 282 | 3.0E-13 | IPR002528 |
| Pfam | PF01554 | MatE | 346 | 493 | 1.1E-11 | IPR002528 |
| TIGRFAM | TIGR00797 | matE: MATE efflux family protein | 44 | 509 | 1.3E-117 | IPR002528 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 176 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G08040.1 | MATE efflux family protein. Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. | 0 |
| RefSeq | XP_031273720.1 | protein DETOXIFICATION 43 [Pistacia vera] | 0 |
| Q9SFB0 | Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9V651 | Protein DETOXIFICATION OS=Manihot esculenta OX=3983 GN=MANES_10G143000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology