Basic Information
Locus ID:
pistato.v30228750
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 31185845 | 31191588 | - | pistato.v30228750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 97,862.41 Da | 33.16 | 65.82 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 9.00046E-22 | IPR001623 |
| Pfam | PF06624 | Ribosome associated membrane protein RAMP4 | 819 | 875 | 1.1E-23 | IPR010580 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 494 | 700 | 3.7E-76 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 8.6E-22 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 58 | 126 | 2.62E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 54 | 146 | 3.3E-24 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 1.2E-23 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 18.075191 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 1.4E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 1.4E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 1.4E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 333 | - | - |
| Coils | Coil | Coil | 750 | 770 | - | - |
Gene Ontology
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25560.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_031272771.1 | uncharacterized protein LOC116131251 [Pistacia vera] | 0 |
| Q8TQR1 | Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A2H5NVJ5 | J domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_079870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology