Basic Information
Locus ID:
pistato.v30226860
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 29307591 | 29310959 | + | pistato.v30226860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 122,268.62 Da | 34.59 | 105.34 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 148 | 170 | 0.51 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 293 | 312 | 1.7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 846 | 1113 | 6.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 584 | 643 | 7.3E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 246 | 267 | 0.034 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 61 | 7.4E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 171 | 231 | 3.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 350 | 725 | 5.35E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 823 | 1115 | 2.83E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 325 | 1.97E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 807 | 919 | 5.2E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 498 | 623 | 3.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 348 | 480 | 5.5E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 624 | 742 | 3.0E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 215 | 3.0E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 220 | 347 | 3.1E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 920 | 1119 | 2.1E-58 | - |
| SMART | SM00220 | serkin_6 | 844 | 1118 | 5.1E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 122 | 145 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 678 | 701 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 606 | 629 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 582 | 605 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 654 | 677 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 314 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 218 | 242 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 64.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 844 | 1118 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 850 | 873 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 964 | 976 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 294 | 307 | 5.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 606 | 619 | 5.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_031268193.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Pistacia vera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067FW30 | Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g043720mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology