Basic Information
Locus ID:
pistato.v30226320
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28595538 | 28602725 | - | pistato.v30226320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 91,038.34 Da | 47.50 | 80.46 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 89 | 285 | 2.42373E-101 | - |
| Pfam | PF00183 | Hsp90 protein | 267 | 778 | 4.8E-194 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 103 | 262 | 2.3E-12 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 627 | 748 | 5.89E-34 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 80 | 295 | 2.1E-62 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 347 | 605 | 3.11E-89 | IPR020568 |
| Gene3D | G3DSA:3.30.230.80 | - | 345 | 517 | 2.1E-73 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 518 | 604 | 4.4E-32 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 66 | 310 | 1.4E-90 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 605 | 752 | 7.9E-53 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 102 | 264 | 1.5E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 48 | 792 | 2.1E-241 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 100 | 109 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 271 | 289 | 7.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 168 | 185 | 7.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 100 | 7.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 150 | 167 | 7.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 101 | 123 | 7.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 252 | 269 | 7.9E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 197 | 219 | 7.9E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 70 | 749 | 26.272503 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 773 | 794 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_031278977.1 | heat shock protein 90-5, chloroplastic isoform X1 [Pistacia vera] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HI85 | HATPase_c domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018020 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology