Basic Information
Locus ID:
pistato.v30225750
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 27518215 | 27524082 | - | pistato.v30225750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 45,503.43 Da | 50.57 | 61.26 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 186 | 1.3E-11 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 184 | 1.11E-21 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 197 | 6.1E-12 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 219 | 14.591178 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_031266521.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Pistacia vera] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HKE0 | NAC domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018105 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology