Basic Information
Locus ID:
pistato.v30225400
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 26947738 | 26950044 | - | pistato.v30225400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 36,357.80 Da | 35.95 | 86.91 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 25 | 325 | 2.2E-74 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 20 | 329 | 1.24E-80 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 10 | 325 | 2.3E-97 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 9 | 249 | 9.4E-8 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 279 | 330 | 0.14 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 12 | 326 | 49.139328 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_031284887.1 | homocysteine S-methyltransferase 1-like [Pistacia vera] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067FRG7 | Hcy-binding domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g020275mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology