Basic Information
Locus ID:
pistato.v30222290
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
AMSH-like ubiquitin thioesterase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 21934637 | 21939847 | - | pistato.v30222290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 35,247.41 Da | 62.37 | 75.30 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 149 | 317 | 2.27448E-78 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 189 | 234 | 1.8E-9 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 152 | 233 | 8.89E-15 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 130 | 183 | 5.6E-6 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 184 | 317 | 1.2E-41 | - |
| ProSiteProfiles | PS50249 | MPN domain profile. | 122 | 265 | 14.883553 | IPR037518 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 148 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10600.1 | associated molecule with the SH3 domain of STAM 2. | 0 |
| RefSeq | XP_031260754.1 | AMSH-like ubiquitin thioesterase 2 isoform X5 [Pistacia vera] | 0 |
| Q6NKP9 | AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067H4C2 | MPN domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g041233mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology