Basic Information
Locus ID:
pistato.v30222030
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 21626309 | 21631909 | - | pistato.v30222030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 56,388.99 Da | 33.38 | 94.22 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 80 | 136 | 8.8E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 73 | 7.5E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 272 | 456 | 1.9E-27 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 146 | 3.06E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 199 | 459 | 1.58E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 273 | 477 | 2.9E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 189 | 272 | 1.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 149 | 5.3E-35 | IPR032675 |
| SMART | SM00220 | serkin_6 | 218 | 458 | 6.8E-15 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 218 | 468 | 23.721811 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 224 | 246 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 308 | 320 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_031277009.1 | protein NSP-INTERACTING KINASE 3-like isoform X1 [Pistacia vera] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5N8M2 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_021330 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology