Basic Information
Locus ID:
pistato.v30221220
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 20648081 | 20651894 | - | pistato.v30221220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 108,870.62 Da | 30.66 | 101.30 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 248 | 270 | 1.1 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 128 | 149 | 1.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 73 | 7.3E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 489 | 548 | 1.7E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 706 | 974 | 3.1E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 343 | 401 | 5.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 428 | 1.96E-65 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 392 | 627 | 2.13E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 976 | 2.29E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 781 | 6.5E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 986 | 4.5E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 268 | 363 | 3.2E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 364 | 632 | 5.2E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 267 | 1.6E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 196 | 3.1E-38 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 367 | 389 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 40.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 953 | 1.4E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 196 | 86.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 984 | 36.329338 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_031256061.1 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Pistacia vera] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A067GBX9 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g012213mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology