Basic Information
Locus ID:
pistato.v30220670
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 19937328 | 19942270 | + | pistato.v30220670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 65,858.28 Da | 56.94 | 85.67 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 122 | 6.5E-22 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 430 | 515 | 2.7E-15 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 155 | 236 | 4.4E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 409 | 517 | 1.97E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 401 | 502 | 5.7E-37 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 133 | 239 | 4.9E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 24 | 124 | 6.8E-26 | IPR038408 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 594 | 14.902196 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 25 | 124 | 19.810972 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 130 | 239 | 18.398844 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 322 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031269427.1 | cysteine-rich receptor-like protein kinase 8 [Pistacia vera] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A2H5Q2I3 | Cysteine-rich receptor-like protein kinase 25 OS=Citrus unshiu OX=55188 GN=CUMW_189640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30199080, pistato.v30199100, pistato.v30199110 ... |