Basic Information
Locus ID:
pistato.v30220630
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 19841448 | 19847856 | + | pistato.v30220630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 52,358.05 Da | 50.99 | 81.44 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 147 | 245 | 1.2E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 133 | 1.6E-20 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 23 | 136 | 4.4E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 402 | 7.0E-6 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 247 | 5.7E-28 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 247 | 21.585184 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 25 | 136 | 18.960073 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031275105.1 | cysteine-rich receptor-like protein kinase 10 [Pistacia vera] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7J6DXR8 | Cysteine-rich receptor-like protein kinase 25 OS=Cannabis sativa OX=3483 GN=F8388_008048 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30199080, pistato.v30199100, pistato.v30199110 ... |