Basic Information
Locus ID:
pistato.v30218980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12169464 | 12175892 | - | pistato.v30218980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 104,191.65 Da | 33.18 | 87.49 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 621 | 895 | 1.35187E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 352 | 392 | 0.0011 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 618 | 890 | 5.8E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 50 | 85 | 2.3E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 407 | 455 | 2.3E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 462 | 2.61E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 910 | 4.93E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 908 | 3.9E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 578 | 692 | 1.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 352 | 480 | 4.1E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 49 | 348 | 2.6E-75 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 133 | 156 | 2.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 157 | 182 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 418 | 442 | 24.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 615 | 896 | 6.7E-45 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 281 | 304 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 208 | 231 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 615 | 895 | 39.876972 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 740 | 752 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 621 | 643 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 969 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_031266965.1 | receptor protein kinase TMK1-like isoform X1 [Pistacia vera] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HJC0 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018414 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology