Basic Information
Locus ID:
pistato.v30218950
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12119509 | 12122387 | - | pistato.v30218950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 80,105.65 Da | 38.45 | 91.63 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 423 | 687 | 4.20797E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 418 | 685 | 3.2E-45 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 229 | 251 | 1.0 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 3 | 29 | 0.036 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 292 | 329 | 0.0013 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 702 | 1.43E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 290 | 358 | 1.87E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 7 | 254 | 7.48E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 390 | 487 | 3.5E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 695 | 2.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 270 | 2.5E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 364 | 3.0E-8 | IPR032675 |
| SMART | SM00220 | serkin_6 | 417 | 690 | 1.9E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 695 | 38.435307 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 423 | 445 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 535 | 547 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24650.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031275095.1 | LOW QUALITY PROTEIN: receptor-like kinase TMK2 [Pistacia vera] | 0 |
| Q9FYK0 | Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7ZJ81 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_031801 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 5 | pistato.v30063460, pistato.v30063470, pistato.v30218920 ... |