Basic Information
Locus ID:
pistato.v30218910
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12072149 | 12074652 | - | pistato.v30218910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 30,039.46 Da | 27.75 | 95.63 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 145 | 253 | 1.1E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 256 | 5.12E-26 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 123 | 4.68E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 123 | 267 | 1.5E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 122 | 9.6E-10 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 142 | 268 | 14.393373 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031275088.1 | receptor-like kinase TMK3 [Pistacia vera] | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I0J7F2 | Protein kinase domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_027435 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg27334 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30063450, pistato.v30218910 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_048927 |