Basic Information
Locus ID:
pistato.v30217080
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 8792454 | 8799685 | - | pistato.v30217080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 195,849.11 Da | 50.45 | 76.93 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 379 | 651 | 3.23106E-133 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1472 | 1726 | 1.03097E-140 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1511 | 1676 | 7.1E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 399 | 647 | 1.6E-31 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1455 | 1726 | 8.5E-78 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 34 | 89 | 2.99E-5 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 445 | 617 | 4.45E-39 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 444 | 617 | 1.2E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1594 | 1729 | 5.3E-38 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1435 | 1592 | 2.2E-36 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1444 | 1727 | 4.3E-110 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 37 | 86 | 8.552567 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1416 | 1735 | 56.144936 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1169 | 1183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1169 | 1188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 197 | - | - |
| Coils | Coil | Coil | 1051 | 1071 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_031255802.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Pistacia vera] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5PQP8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Citrus unshiu OX=55188 GN=CUMW_158680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology