Basic Information
Locus ID:
pistato.v30216730
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Serine-threonine kinase receptor-associated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 7918175 | 7920914 | - | pistato.v30216730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 25,386.48 Da | 36.29 | 89.64 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00481 | Protein phosphatase 2C | 158 | 206 | 2.5E-7 | IPR001932 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 50 | 99 | 1.3E-4 | IPR024977 |
| SUPERFAMILY | SSF81606 | PP2C-like | 152 | 217 | 9.68E-10 | IPR036457 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 19 | 136 | 2.04E-20 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 10 | 137 | 1.2E-18 | IPR015943 |
| Gene3D | G3DSA:3.60.40.10 | - | 138 | 217 | 4.4E-7 | IPR036457 |
| SMART | SM00320 | WD40_4 | 85 | 122 | 0.048 | IPR001680 |
| SMART | SM00320 | WD40_4 | 42 | 82 | 0.71 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52730.3 | - | 0 |
| RefSeq | XP_031256107.1 | serine-threonine kinase receptor-associated protein-like [Pistacia vera] | 0 |
| Q9SR24 | Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana OX=3702 GN=PLL3 PE=3 SV=1 | 0 | |
| TrEMBL | I1MUD7 | WD_REPEATS_REGION domain-containing protein OS=Glycine max OX=3847 GN=100782712 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 4 | pistato.v30052070, pistato.v30193990, pistato.v30216730 ... |
| Poaceae | Zea mays | 1 | Zm00001eb397680_P001 |