Basic Information
Locus ID:
pistato.v30215230
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 6186176 | 6189521 | - | pistato.v30215230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.58 | 89,629.60 Da | 42.10 | 95.33 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09272 | RNase_HI_RT_Ty1 | 307 | 405 | 6.16291E-35 | - |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 38 | 221 | 4.3E-24 | IPR013103 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 564 | 778 | 4.2E-19 | IPR001245 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 58 | 406 | 1.42E-6 | IPR043502 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 501 | 781 | 4.76E-36 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 503 | 596 | 3.1E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 601 | 785 | 8.5E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 448 | 780 | 17.799665 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031248144.1 | non-functional pseudokinase ZED1-like [Pistacia vera] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4Y1S1J1 | Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_022482 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 11 | pistato.v30083860, pistato.v30083870, pistato.v30083960 ... |