Basic Information
Locus ID:
pistato.v30214760
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 4925676 | 4932776 | + | pistato.v30214760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 128,171.84 Da | 44.95 | 92.64 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 282 | 309 | 7.45796E-4 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 363 | 565 | 7.4E-30 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 677 | 915 | 5.3E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 626 | 921 | 1.64E-44 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 361 | 601 | 8.5E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 945 | 1.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 370 | 579 | 1.3E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 613 | 689 | 1.7E-14 | - |
| SMART | SM00220 | serkin_6 | 277 | 568 | 1.5E-12 | IPR000719 |
| SMART | SM00220 | serkin_6 | 642 | 920 | 4.8E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 642 | 920 | 19.184797 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 277 | 568 | 27.156374 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 648 | 670 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25390.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031256871.1 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Pistacia vera] | 0 |
| Q9C6K9 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HJY5 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018643 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 5 | pistato.v30214670, pistato.v30214760, pistato.v30214870 ... |