Basic Information
Locus ID:
pistato.v30211530
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 28381347 | 28383467 | - | pistato.v30211530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 41,704.00 Da | 70.18 | 81.78 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 97 | 194 | 9.9E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 206 | 274 | 8.75E-5 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 198 | 1.08E-26 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 62 | 170 | 1.8E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 193 | 297 | 4.9E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 92 | 366 | 13.050642 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 98 | 120 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.2 | - | 0 |
| RefSeq | XP_031262701.1 | receptor-like protein kinase THESEUS 1 [Pistacia vera] | 0 |
| Q9LT96 | Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana OX=3702 GN=At5g49770 PE=1 SV=1 | 0 | |
| TrEMBL | V4RV45 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025531mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30211530 |
| Apiaceae | Apium graveolens | 1 | Ag7G02425 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G015190 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708723 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2197.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G01419 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0118 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10445 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00001039 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.65 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-16983 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13644 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11680 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.1318 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-15692 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2967 |
| Salicaceae | Populus euphratica | 1 | populus_peu14081 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132623240 |
| Solanaceae | Solanum chilense | 1 | SOLCI002961600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011150 |