Basic Information
Locus ID:
pistato.v30210750
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 27558967 | 27560299 | - | pistato.v30210750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 39,667.25 Da | 39.34 | 60.43 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 131 | 361 | 7.79248E-117 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 66 | 104 | 1.41463E-17 | - |
| Pfam | PF00182 | Chitinase class I | 130 | 361 | 9.1E-135 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 67 | 104 | 1.4E-13 | IPR001002 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 126 | 368 | 9.56E-109 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 67 | 113 | 5.89E-13 | IPR036861 |
| Gene3D | G3DSA:3.30.60.10 | - | 65 | 106 | 9.4E-17 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 213 | 270 | 1.5E-123 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 135 | 367 | 1.5E-123 | - |
| SMART | SM00270 | ChitinBD_3 | 67 | 104 | 6.4E-17 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 38 | 368 | 2.2E-126 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 65 | 106 | 10.935556 | IPR001002 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 77 | 96 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 274 | 284 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 148 | 170 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 90 | 97 | 4.3E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 83 | 90 | 4.3E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 75 | 83 | 4.3E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_031276028.1 | basic endochitinase-like [Pistacia vera] | 0 |
| P93680 | Endochitinase OS=Persea americana OX=3435 GN=chi1 PE=1 SV=2 | 0 | |
| TrEMBL | Q9FS45 | Chitinase OS=Vitis vinifera OX=29760 GN=chit1b PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology