Basic Information
Locus ID:
pistato.v30210430
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like protein kinase At5g15080
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 27248177 | 27257120 | - | pistato.v30210430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.71 | 51,014.03 Da | 41.68 | 65.19 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 129 | 311 | 6.4E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 112 | 377 | 7.11E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 313 | 381 | 7.8E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 107 | 211 | 2.0E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 212 | 312 | 2.2E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 462 | 26.71822 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 133 | 165 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 413 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031287276.1 | probable serine/threonine-protein kinase PIX7 [Pistacia vera] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | F6H5R1 | Protein kinase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_14s0108g00380 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg40284 |
| Anacardiaceae | Pistacia vera | 5 | pistato.v30193930, pistato.v30194990, pistato.v30210420 ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000346 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr18G015950 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-13540, nbis-gene-29654 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21449 |