Basic Information
Locus ID:
pistato.v30210160
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 27007249 | 27016495 | + | pistato.v30210160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 105,416.69 Da | 37.02 | 80.95 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 41 | 285 | 3.65895E-143 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 128 | 319 | 2.7E-42 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 855 | 937 | 1.1E-7 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 323 | 407 | 4.6E-13 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 562 | 773 | 1.5E-50 | IPR011682 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 30 | 320 | 5.11E-91 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 323 | 412 | 6.87E-19 | IPR028995 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 420 | 940 | 5.96E-142 | IPR011013 |
| Gene3D | G3DSA:2.60.40.1360 | - | 842 | 879 | 6.0E-7 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 41 | 130 | 6.9E-37 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 358 | 413 | 1.7E-21 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 131 | 289 | 3.1E-54 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 290 | 357 | 9.4E-14 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 556 | 821 | 7.1E-103 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 425 | 536 | 6.1E-27 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 880 | 940 | 1.5E-12 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 320 | 389 | 2.1E-13 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_031257596.1 | LOW QUALITY PROTEIN: alpha-mannosidase-like [Pistacia vera] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A067FYR6 | Alpha-mannosidase OS=Citrus sinensis OX=2711 GN=CISIN_1g001850mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology