Basic Information
Locus ID:
pistato.v30209840
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 26647901 | 26651257 | - | pistato.v30209840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 62,742.26 Da | 42.77 | 107.26 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 3 | 41 | 1.9E-7 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 74 | 326 | 1.02E-14 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 46 | 2.75E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 40 | 9.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 61 | 435 | 6.0E-13 | IPR032675 |
| SMART | SM00256 | fbox_2 | 7 | 47 | 0.0073 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 36 | 9.417986 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.2 | - | 0 |
| RefSeq | XP_031258469.1 | F-box/FBD/LRR-repeat protein At5g56420-like isoform X1 [Pistacia vera] | 0 |
| Q9FZ70 | F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1 | 0 | |
| TrEMBL | V4T217 | F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10000694mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology