Basic Information
Locus ID:
pistato.v30209800
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 26620727 | 26623264 | - | pistato.v30209800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 65,402.01 Da | 45.25 | 86.18 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 406 | 466 | 3.6E-9 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 151 | 353 | 3.1E-11 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 468 | 2.16E-15 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 391 | 462 | 1.2E-7 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 46 | 180 | 3.1E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 463 | 545 | 8.5E-11 | - |
| SMART | SM00219 | tyrkin_6 | 400 | 539 | 6.1E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 584 | 10.902274 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 406 | 430 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 94 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_031248487.1 | receptor-like protein kinase FERONIA [Pistacia vera] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | V4T2J5 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011088mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 5 | pistato.v30192840, pistato.v30192850, pistato.v30193010 ... |