Basic Information
Locus ID:
pistato.v30208820
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 25135613 | 25146814 | - | pistato.v30208820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 201,567.70 Da | 45.19 | 75.76 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 386 | 658 | 3.83802E-139 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1515 | 1779 | 5.1458E-136 | IPR044769 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 101 | 4.2E-16 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1554 | 1721 | 2.4E-28 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 407 | 652 | 6.6E-34 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1513 | 1779 | 6.34E-73 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 452 | 624 | 6.54E-45 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 104 | 3.02E-18 | IPR011011 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 451 | 624 | 1.4E-56 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1638 | 1780 | 1.4E-42 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 106 | 7.6E-20 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1482 | 1636 | 1.9E-27 | IPR027484 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 1.9E-18 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1488 | 1780 | 2.4E-107 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 13.008968 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1441 | 1779 | 51.622898 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 189 | - | - |
| Coils | Coil | Coil | 1102 | 1122 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_031267476.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Pistacia vera] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HZA4 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Acer yangbiense OX=1000413 GN=EZV62_013079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology