Basic Information
Locus ID:
pistato.v30205960
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 19577547 | 19581992 | + | pistato.v30205960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 34,311.34 Da | 44.34 | 99.41 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 46 | 241 | 5.7E-28 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 300 | 1.63E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 15 | 110 | 1.7E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 114 | 302 | 1.3E-29 | - |
| SMART | SM00220 | serkin_6 | 36 | 281 | 1.4E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 303 | 22.916174 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46070.2 | mitogen-activated protein kinase 12. Encodes a MAP kinase protein. MPK12 interacts with the IBR5 protein phosphatase in vitro and in vivo, and it can be dephosphorylated and inactivated by IBR5. MPK12 appears to be a negative regulator of auxin signlaing. MPK12 RNAi lines are hypersensitive to auxin in root elongation and transcriptional response assays, but they appear to have normal sensitivity to ABA. MPK12 is a nuclear protein and its kinase activity is increased following auxin treatment. MPK12 transcripts are widely expressed in seedlings, but MPK12 expression is stronger in guard cells than in other cell types in mature plants. | 0 |
| RefSeq | XP_031268823.1 | cell division control protein 2 homolog [Pistacia vera] | 0 |
| P34112 | Cyclin-dependent kinase 1 OS=Dictyostelium discoideum OX=44689 GN=cdk1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A833RB43 | Cell division control protein 2 A-like isoform X2 OS=Carex littledalei OX=544730 GN=FCM35_KLT20643 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 4 | pistato.v30174420, pistato.v30205920, pistato.v30205960 ... |