Basic Information
Locus ID:
pistato.v30205610
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 18877193 | 18879673 | + | pistato.v30205610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 72,638.27 Da | 36.27 | 85.90 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 34 | 384 | 1.2E-31 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 470 | 519 | 4.55E-8 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 462 | 536 | 4.6E-13 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 211 | 386 | 1.2E-22 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 31 | 181 | 4.2E-20 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23200.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031253606.1 | LOW QUALITY PROTEIN: probable receptor-like protein kinase At2g23200 [Pistacia vera] | 0 |
| O22187 | Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana OX=3702 GN=At2g23200 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5C7HRD0 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013931 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg30686, jg30687, jg30689, jg30691, jg30692, jg39988 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30205610 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G02862 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000544m.g.v1.0 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22992 |