Basic Information
Locus ID:
pistato.v30205170
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 18123725 | 18129737 | + | pistato.v30205170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 69,969.06 Da | 45.18 | 87.28 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 21 | 124 | 1.18644E-47 | - |
| Pfam | PF03000 | NPH3 family | 211 | 467 | 1.3E-92 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 117 | 1.7E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 117 | 8.63E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 121 | 6.8E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 29 | 127 | 0.0054 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 491 | 91.134293 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 10.509501 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 592 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 532 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_031253446.1 | BTB/POZ domain-containing protein NPY5-like [Pistacia vera] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HSN5 | BTB/POZ domain-containing protein NPY4 OS=Acer yangbiense OX=1000413 GN=EZV62_013869 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology