Basic Information
Locus ID:
pistato.v30204450
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 17056045 | 17060226 | + | pistato.v30204450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 107,555.92 Da | 37.01 | 95.12 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 4.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 70 | 5.2E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 687 | 952 | 1.3E-33 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 316 | 621 | 4.08E-47 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 390 | 6.91E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 956 | 1.5E-58 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 87 | 4.9E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 88 | 314 | 4.8E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 315 | 631 | 6.3E-79 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 764 | 964 | 2.7E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 762 | 5.5E-19 | - |
| SMART | SM00220 | serkin_6 | 686 | 960 | 2.7E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 956 | 27.622795 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 715 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 808 | 820 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_031283778.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Pistacia vera] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9US16 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G106200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology