Basic Information
Locus ID:
pistato.v30204260
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 16447178 | 16453914 | + | pistato.v30204260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 44,073.06 Da | 44.32 | 69.68 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 69 | 367 | 9.4E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 257 | 360 | 2.94E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 256 | 374 | 1.2E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 259 | 361 | 25.865023 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_031260494.1 | auxin-responsive protein IAA9 isoform X1 [Pistacia vera] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HUT5 | Auxin-responsive protein OS=Acer yangbiense OX=1000413 GN=EZV62_014599 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology