Basic Information
Locus ID:
pistato.v30202730
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 12257957 | 12261152 | - | pistato.v30202730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 52,453.44 Da | 42.89 | 86.35 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 150 | 350 | 5.5E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 120 | 414 | 1.07E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 224 | 434 | 3.7E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 223 | 2.0E-24 | - |
| SMART | SM00220 | serkin_6 | 146 | 391 | 1.3E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 146 | 431 | 33.71455 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 152 | 175 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 268 | 280 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| Coils | Coil | Coil | 173 | 193 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031287636.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 [Pistacia vera] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NF37 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_039520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology