Basic Information
Locus ID:
pistato.v30200850
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 6689214 | 6692011 | - | pistato.v30200850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 46,442.39 Da | 52.35 | 85.08 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 296 | 363 | 1.9E-11 | IPR001245 |
| SUPERFAMILY | SSF52075 | Outer arm dynein light chain 1 | 3 | 75 | 1.01E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 265 | 360 | 4.35E-22 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 94 | 2.6E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 363 | 6.4E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 292 | 411 | 11.962324 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 298 | 320 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031251474.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Pistacia vera] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7EZB0 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G232500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30110700, pistato.v30200850 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5728 |