Basic Information
Locus ID:
pistato.v30200010
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 5374129 | 5376996 | + | pistato.v30200010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 54,179.94 Da | 50.63 | 80.43 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 317 | 429 | 3.0E-9 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 245 | 4.9E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 131 | 1.8E-17 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 327 | 456 | 8.46E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 298 | 441 | 3.1E-24 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 248 | 4.7E-25 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 134 | 4.0E-22 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 248 | 19.638981 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 134 | 19.104908 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23220.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 14. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031268669.1 | cysteine-rich receptor-like protein kinase 11 [Pistacia vera] | 0 |
| Q8H199 | Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CRK14 PE=2 SV=2 | 0 | |
| TrEMBL | V4USX9 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011354mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30032140, pistato.v30032180, pistato.v30200010 |