Basic Information
Locus ID:
pistato.v30199530
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
CRK5
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4689527 | 4691910 | + | pistato.v30199530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 46,727.76 Da | 35.76 | 98.63 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 32 | 89 | 1.6E-13 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 271 | 407 | 8.7E-18 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 110 | 187 | 1.1E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 243 | 415 | 5.06E-35 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 416 | 8.8E-12 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 100 | 193 | 8.3E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 14 | 91 | 7.1E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 236 | 324 | 2.3E-21 | - |
| SMART | SM00219 | tyrkin_6 | 259 | 416 | 4.9E-6 | IPR020635 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 92 | 14.135304 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 98 | 205 | 15.764682 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 259 | 416 | 19.933899 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 371 | 383 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_031284373.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A822XN63 | Receptor-like protein kinase At4g00960 OS=Nelumbo nucifera OX=4432 GN=HUJ06_022094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30198520, pistato.v30199530, pistato.v30242290 |