Basic Information
Locus ID:
pistato.v30199110
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4276432 | 4281304 | - | pistato.v30199110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 45,906.69 Da | 49.18 | 78.37 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 31 | 134 | 1.0E-20 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 152 | 246 | 1.3E-13 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 310 | 386 | 2.51E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 144 | 248 | 2.1E-28 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 136 | 1.1E-23 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 284 | 382 | 7.9E-8 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 136 | 18.806189 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 248 | 20.942484 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 418 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031269327.1 | LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 10 [Pistacia vera] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2H5Q2N7 | Cysteine-rich receptor-like protein kinase 10 OS=Citrus unshiu OX=55188 GN=CUMW_189670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30199080, pistato.v30199100, pistato.v30199110 ... |