Basic Information
Locus ID:
pistato.v30199080
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4237363 | 4241210 | - | pistato.v30199080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 61,332.75 Da | 57.59 | 84.40 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 428 | 513 | 2.1E-15 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 155 | 236 | 3.9E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 122 | 5.8E-22 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 409 | 518 | 2.81E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 401 | 502 | 4.4E-37 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 132 | 239 | 4.4E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 24 | 124 | 6.0E-26 | IPR038408 |
| SMART | SM00219 | tyrkin_6 | 427 | 549 | 7.9E-4 | IPR020635 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 25 | 124 | 19.810972 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 550 | 14.237899 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 130 | 239 | 18.398844 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 322 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031269427.1 | cysteine-rich receptor-like protein kinase 8 [Pistacia vera] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2H5Q2I3 | Cysteine-rich receptor-like protein kinase 25 OS=Citrus unshiu OX=55188 GN=CUMW_189640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30199080, pistato.v30199100, pistato.v30199110 ... |