Basic Information
Locus ID:
pistato.v30199020
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4152786 | 4158097 | - | pistato.v30199020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 140,088.83 Da | 41.00 | 105.77 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 185 | 266 | 2.38897E-4 | - |
| Pfam | PF00931 | NB-ARC domain | 164 | 283 | 5.4E-17 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 294 | 413 | 1.9E-15 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 530 | 954 | 1.36E-19 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 159 | 427 | 9.37E-44 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 982 | 1109 | 5.1E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 533 | 959 | 2.7E-36 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 148 | 325 | 2.0E-26 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 416 | 7.5E-17 | IPR042197 |
| SMART | SM00382 | AAA_5 | 178 | 338 | 2.6E-5 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 361 | 375 | 1.7E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 251 | 265 | 1.7E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 640 | 656 | 1.7E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 181 | 196 | 1.7E-19 | - |
| Coils | Coil | Coil | 157 | 177 | - | - |
| Coils | Coil | Coil | 39 | 59 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27220.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031272218.1 | uncharacterized protein LOC116130624 [Pistacia vera] | 0 |
| O81825 | Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana OX=3702 GN=At4g27220 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IXP6 | NB-ARC domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002497 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology