Basic Information
Locus ID:
pistato.v30198980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4047647 | 4054565 | - | pistato.v30198980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 173,057.23 Da | 42.87 | 108.56 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 165 | 269 | 0.00905923 | - |
| Pfam | PF00931 | NB-ARC domain | 168 | 417 | 2.6E-35 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 163 | 430 | 5.48E-45 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 917 | 1233 | 4.39E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1278 | 1490 | 3.88E-12 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 490 | 893 | 9.52E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1279 | 1485 | 5.9E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 330 | 418 | 1.9E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 909 | 1256 | 2.3E-15 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 149 | 328 | 1.3E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 510 | 908 | 9.7E-33 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 181 | 196 | 4.3E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 641 | 657 | 4.3E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 364 | 378 | 4.3E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 4.3E-20 | - |
| Coils | Coil | Coil | 39 | 73 | - | - |
| Coils | Coil | Coil | 777 | 797 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031272218.1 | uncharacterized protein LOC116130624 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ30 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology