Basic Information
Locus ID:
pistato.v30198840
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3878583 | 3886988 | + | pistato.v30198840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 71,866.72 Da | 45.66 | 97.06 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 153 | 234 | 3.7E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 529 | 614 | 2.7E-16 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 131 | 9.5E-19 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 392 | 496 | 5.5E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 304 | 503 | 5.56E-29 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 349 | 1.3E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 370 | 506 | 7.7E-24 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 237 | 3.1E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 133 | 1.1E-26 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 523 | 625 | 1.0E-21 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 523 | 631 | 16.497902 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 134 | 20.833858 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 237 | 18.525574 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_031278635.1 | LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 10 [Pistacia vera] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1U8Q1U3 | LOW QUALITY PROTEIN: uncharacterized protein LOC104590182 OS=Nelumbo nucifera OX=4432 GN=LOC104590182 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |