Basic Information
Locus ID:
pistato.v30198820
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3870582 | 3873455 | + | pistato.v30198820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 42,406.08 Da | 52.41 | 89.03 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 171 | 249 | 1.2E-9 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 251 | 280 | 2.0E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 157 | 286 | 8.75E-34 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 140 | 242 | 2.5E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 5 | 89 | 2.8E-6 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 248 | 295 | 6.7E-11 | - |
| SMART | SM00220 | serkin_6 | 168 | 343 | 4.8E-6 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 89 | 9.609254 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 168 | 382 | 9.856359 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 252 | 264 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 376 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 34. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031251353.1 | LOW QUALITY PROTEIN: putative cysteine-rich receptor-like protein kinase 35 [Pistacia vera] | 0 |
| Q9LDQ3 | Cysteine-rich receptor-like protein kinase 34 OS=Arabidopsis thaliana OX=3702 GN=CRK34 PE=3 SV=3 | 0 | |
| TrEMBL | A0A6P5WWU0 | cysteine-rich receptor-like protein kinase 10 isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111278247 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |