Basic Information
Locus ID:
pistato.v30198660
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3104003 | 3114584 | + | pistato.v30198660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 64,859.41 Da | 49.00 | 74.36 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 10 | 91 | 6.4E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 213 | 305 | 1.8E-17 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 329 | 400 | 3.2E-11 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 203 | 307 | 1.8E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 320 | 424 | 2.2E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 5 | 113 | 2.8E-18 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 3 | 113 | 16.199183 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 202 | 308 | 17.25828 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 314 | 424 | 16.18108 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23220.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 14. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031254697.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q8H199 | Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CRK14 PE=2 SV=2 | 0 | |
| TrEMBL | V4USX9 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011354mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |