halophFGD

Basic Information

Locus ID: pistato.v30198610

Species & Taxonomic ID: Pistacia vera & 55513

Genome Assembly: GWHBKLD00000000

Description: Cysteine-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	3039665	3044270	+	pistato.v30198610

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.50	36,662.92 Da	45.58	67.69	-0.33

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01657	Salt stress response/antifungal	111	186	1.2E-9	IPR002902
Pfam	PF01657	Salt stress response/antifungal	7	90	5.2E-13	IPR002902
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	209	287	3.2E-5	-
Gene3D	G3DSA:3.30.430.20	-	104	208	6.9E-19	IPR038408
Gene3D	G3DSA:3.30.430.20	-	2	92	3.4E-18	IPR038408
ProSiteProfiles	PS51473	Gnk2-homologous domain profile.	1	93	14.995254	IPR002902
ProSiteProfiles	PS51473	Gnk2-homologous domain profile.	99	209	14.85042	IPR002902

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23190.2	-
RefSeq	XP_031254692.1	cysteine-rich receptor-like protein kinase 18 [Pistacia vera]
Swiss-Prot	Q9ZP16	Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana OX=3702 GN=CRK11 PE=2 SV=2
TrEMBL	V4USX9	Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011354mg PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	21	pistato.v30128710, pistato.v30173520, pistato.v30173530 ... pistato.v30173540, pistato.v30173550, pistato.v30173590, pistato.v30198400, pistato.v30198420, pistato.v30198500, pistato.v30198530, pistato.v30198560, pistato.v30198610, pistato.v30198620, pistato.v30198630, pistato.v30198660, pistato.v30198820, pistato.v30198840, pistato.v30199510, pistato.v30292770, pistato.v30292790, pistato.v30292830
Brassicaceae	Brassica nigra	1	BniB07g024080.2N
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG12.589, evm.TU.LG12.599