Basic Information
Locus ID:
pistato.v30198590
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3015954 | 3020382 | + | pistato.v30198590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 44,069.46 Da | 43.62 | 103.67 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09272 | RNase_HI_RT_Ty1 | 58 | 185 | 6.27597E-58 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 299 | 380 | 6.2E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 228 | 380 | 8.63E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 206 | 299 | 8.0E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 300 | 390 | 3.1E-22 | - |
| SMART | SM00220 | serkin_6 | 238 | 385 | 2.6E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 392 | 18.02581 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 301 | 313 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.2 | - | 0 |
| RefSeq | XP_031282916.1 | secreted RxLR effector protein 161-like [Pistacia vera] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2N9G618 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25978 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30198590 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_025322 |
| Poaceae | Oryza coarctata | 1 | Oco01G017510 |
| Poaceae | Sporobolus alterniflorus | 10 | Chr01G000210, Chr05G011570, Chr05G013330, Chr0G006590 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132628466 |