Basic Information
Locus ID:
pistato.v30198560
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2940369 | 2944697 | + | pistato.v30198560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 45,569.97 Da | 48.57 | 77.00 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 153 | 224 | 2.0E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 31 | 129 | 1.9E-18 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 144 | 248 | 1.9E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 131 | 3.0E-22 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 138 | 248 | 16.135818 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 132 | 18.000551 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23220.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 14. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031254697.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q8H199 | Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CRK14 PE=2 SV=2 | 0 | |
| TrEMBL | V4USX9 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011354mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |