Basic Information
Locus ID:
pistato.v30198400
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2732477 | 2757546 | - | pistato.v30198400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 259,372.16 Da | 52.17 | 83.39 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 866 | 963 | 1.8E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 2013 | 2104 | 3.2E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 1229 | 1306 | 2.6E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 389 | 486 | 1.2E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 983 | 1053 | 5.9E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 229 | 325 | 2.8E-6 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1751 | 1847 | 2.9E-6 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 149 | 229 | 6.6E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 1897 | 1993 | 9.9E-22 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 1466 | 1559 | 6.5E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 505 | 598 | 2.6E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 131 | 6.8E-21 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 1124 | 1209 | 6.8E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 1579 | 1671 | 9.2E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 229 | 356 | 2.71E-13 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 809 | 2.11E-11 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2195 | 2233 | 6.33E-5 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1753 | 1849 | 1.21E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 975 | 1072 | 4.7E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1889 | 1995 | 1.1E-28 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 498 | 605 | 1.4E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2175 | 2248 | 9.8E-9 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 383 | 489 | 2.0E-25 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1751 | 1862 | 5.3E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 667 | 785 | 6.8E-17 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 1222 | 1313 | 3.6E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 133 | 2.7E-29 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1119 | 1211 | 3.8E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 238 | 4.2E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 860 | 966 | 8.4E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 2003 | 2107 | 2.1E-31 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1456 | 1562 | 5.6E-25 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1571 | 1678 | 2.5E-20 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 383 | 489 | 19.792868 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 134 | 21.874851 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 860 | 966 | 19.54846 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 2002 | 2107 | 23.667166 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1107 | 1212 | 15.321129 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1456 | 1562 | 18.932919 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 245 | 18.244959 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1218 | 1323 | 16.362122 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1568 | 1678 | 16.208235 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 495 | 605 | 16.371174 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 972 | 1083 | 13.248199 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1891 | 1996 | 21.874851 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2304 | 2328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2113 | 2132 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044469690.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC123198949 [Mangifera indica] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A835K9Y8 | Cysteine-rich receptor-like protein kinase 25 OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf04G0014100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |