Basic Information
Locus ID:
pistato.v30196950
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
F-box protein At4g22030
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 1021066 | 1045695 | - | pistato.v30196950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 252,749.39 Da | 43.89 | 94.77 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14476 | Petal formation-expressed | 1349 | 1670 | 5.1E-155 | IPR027949 |
| Pfam | PF14476 | Petal formation-expressed | 926 | 1248 | 1.3E-154 | IPR027949 |
| Pfam | PF14476 | Petal formation-expressed | 92 | 413 | 5.7E-159 | IPR027949 |
| Pfam | PF14476 | Petal formation-expressed | 2152 | 2302 | 1.3E-76 | IPR027949 |
| Pfam | PF14476 | Petal formation-expressed | 514 | 835 | 7.2E-156 | IPR027949 |
| Pfam | PF14476 | Petal formation-expressed | 1761 | 2066 | 2.2E-144 | IPR027949 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 270 | - | - |
| Coils | Coil | Coil | 1530 | 1550 | - | - |
| Coils | Coil | Coil | 273 | 293 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22030.1 | F-box family protein with a domain of unknown function (DUF295). | 0 |
| RefSeq | XP_031260301.1 | probable F-box protein At4g22030 [Pistacia vera] | 0 |
| O65451 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3S3MT35 | Putative F-box protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00264300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology